3.2 Pasantías y ponencias
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Examinando 3.2 Pasantías y ponencias por Autor "rp00555"
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PublicaciónConstruction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps( 2013)
;Sharma, SK ;Bolser, D ;de Boer, J ;Sonderkaer, M ;Amoros, W ;Carboni, MF ;D'Ambrosio, JM ;de la Cruz, G ;Di Genova, A ;Douches, DS ;Eguiluz, M ;Guo, X ;Guzman, F ;Hackett, CA ;Hamilton, JP ;Li, GC ;Li, Y ;Lozano, R ;Maass, A ;Marshall, D ;Martinez, D ;McLean, K ;Mejia, N ;Milne, L ;Munive, S ;Nagy, I ;Ponce, O ;Ramirez, M ;Simon, R ;Thomson, SJ ;Torres, Y ;Waugh, R ;Zhang, ZH ;Huang, SW ;Visser, RGF ;Bachem, CWB ;Sagredo, B ;Feingold, SE ;Orjeda, G ;Veilleux, RE ;Bonierbale, M ;Jacobs, JME ;Milbourne, D ;Martin, DMABryan, GJ -
PublicaciónGenome-Wide Identification and Mapping of NBS-Encoding Resistance Genes in Solanum tuberosum Group Phureja(PLOS, 2012)
;Lozano, R ;Ponce, O ;Ramirez, M ;Mostajo, NOrjeda, GThe majority of disease resistance (R) genes identified to date in plants encode a nucleotide-binding site (NBS) and leucine-rich repeat (LRR) domain containing protein. Additional domains such as coiled-coil (CC) and TOLL/interleukin-1 receptor (TIR) domains can also be present. In the recently sequenced Solanum tuberosum group phureja genome we used HMM models and manual curation to annotate 435 NBS-encoding R gene homologs and 142 NBS-derived genes that lack the NBS domain. Highly similar homologs for most previously documented Solanaceae R genes were identified. A surprising ∼41% (179) of the 435 NBS-encoding genes are pseudogenes primarily caused by premature stop codons or frameshift mutations. Alignment of 81.80% of the 577 homologs to S. tuberosum group phureja pseudomolecules revealed non-random distribution of the R-genes; 362 of 470 genes were found in high density clusters on 11 chromosomes.